Bioinformatics Research Engineer – Genomic and Transcriptomic Data Management, NGS Quality Control and R Shiny Development

id="offer-description" class="ecl-u-type-heading-2 ecl-u-mt-none ecl-u-mb-l">Offer Description The Translational and Therapeutic Target Research in Pancreatic Cancer (PaCaTeam) at the Cancer Research Center of Marseille (CRCM, INSERM) is recruiting a Bioinformatics Research Engineer for a 12-month renewable position, starting on 1 December 2026. Our team conducts translational research in pancreatic cancer, combining patient cohorts, patient-derived experimental models (primary cell cultures, organoids and xenografts), molecular profiling and therapeutic response studies. Through the PaCaOmics programme and related research projects, we have generated extensive collections of clinical, genomic, transcriptomic, pharmacological and experimental data. These datasets originate from multiple cohorts, sequencing platforms and experimental protocols, with several samples and experimental models frequently associated with the same patient. We are looking for a bioinformatics engineer to organise, integrate, quality-control and facilitate the scientific exploitation of these heterogeneous datasets. Main responsibilities: . Scientific data management: Design and maintain a structured, centralised data environment linking patients, biological samples, experimental models and molecular analyses, ensuring traceability, consistency and interoperability. NGS quality control: Develop and implement reproducible quality-control procedures for genomic and transcriptomic datasets, including bulk